[1] LEI S,ZHENG R,ZHANG S,et al.Global patterns of breast cancer incidence and mortality:a population-based cancer registry data analysis from 2000 to 2020[J].Cancer Commun(Lond),2021,41(11):1183-1194.
[2] LUO C,LI N,LU B,et al.Global and regional trends in incidence and mortality of female breast cancer and associated factors at national level in 2000 to 2019[J].Chin Med J(Engl),2021,135(1):42-51.
[3] DUGGAN C,TRAPANI D,ILBAWI AM,et al.National health system characteristics,breast cancer stage at diagnosis,and breast cancer mortality:a population-based analysis[J].Lancet Oncol,2021,22(11):1632-1642.
[4] SHI L,SHENG J,WANG M,et al.Combination therapy of TGF-β blockade and commensal-derived probiotics provides enhanced antitumor immune response and tumor suppression[J].Theranostics,2019,9(14):4115-4129.
[5] CHIBA A,BAWANEH A,VELAZQUEZ C,et al.Neoadjuvant chemotherapy shifts breast tumor microbiota populations to regulate drug responsiveness and the development of metastasis[J].Mol Cancer Res,2020,18(1):130-139.
[6] PARIDA S,WU S,SIDDHARTH S,et al.A procarcinogenic colon microbe promotes breast tumorigenesis and metastatic progression and concomitantly activates notch and beta-catenin axes[J].Cancer Discov,2021,11(5):1138-1157.
[7] PARHI L,ALON-MAIMON T,SOL A,et al.Breast cancer colonization by fusobacterium nucleatum accelerates tumor growth and metastatic progression[J].Nat Commun,2020,11(1):3259.
[8] MARWAHA AK,MORRIS JA,RIGBY RJ.Hypothesis:bacterial induced inflammation disrupts the orderly progression of the stem cell hierarchy and has a role in the pathogenesis of breast cancer[J].Med Hypotheses,2020,136:109530.
[9] NEJMAN D,LIVYATAN I,FUKS G,et al.The human tumor microbiome is composed of tumor type-specific intracellular bacteria[J].Science,2020,368(6494):973-980.
[10] ZUBIRIA-BARRERA C,STOCK M,NEUBERT R,et al.A simple sequence-based filtering method for the removal of contaminants in low-biomass 16S rRNA amplicon sequencing approaches[J].J Microbiol Methods,2020,178:106060.
[11] EISENHOFER R,MINICH JJ,MAROTZ C,et al.Contamination in low microbial biomass microbiome studies:issues and recommendations[J].Trends Microbiol,2019,27(2):105-117.
[12] MOOSSAVI S,SEPEHRI S,ROBERTSON B,et al.Composition and variation of the human milk microbiota are influenced by maternal and early-life factors[J].Cell Host Microbe,2019,25(2):324-335.
[13] DONNET-HUGHES A,PEREZ PF,DORE J,et al.Potential role of the intestinal microbiota of the mother in neonatal immune education[J].Proc Nutr Soc,2010,69(3):407-415.
[14] HIEKEN TJ,CHEN J,HOSKIN TL,et al.The microbiome of aseptically collected human breast tissue in benign and malignant disease[J].Sci Rep,2016,6:30751.
[15] BANERJEE S,TIAN T,WEI Z,et al.Distinct microbial signatures associated with different breast cancer types[J].Front Microbiol,2018,9:951.
[16]] MENG S,CHEN B,YANG J,et al.Study of microbiomes in aseptically collected samples of human breast tissue using needle biopsy and the potential role of in situ tissue microbiomes for promoting malignancy[J].Front Oncol,2018,8:318.
[17] THOMPSON KJ,INGLE JN,TANG X,et al.A comprehensive analysis of breast cancer microbiota and host gene expression[J].PLoS One,2017,12(11):e0188873.
[18] XUAN C,SHAMONKI JM,CHUNG A,et al.Microbial dysbiosis is associated with human breast cancer[J].PLoS One,2014,9(1):e83744.
[19] BANERJEE S,WEI Z,TAN F,et al.Distinct microbiological signatures associated with triple negative breast cancer[J].Sci Rep,2015,5:15162.
[20] PASCUAL J,MACIAN MC,ARAHAL DR,et al.Multilocus sequence analysis of the central clade of the genus vibrio by using the 16S rRNA,recA,pyrH,rpoD,gyrB,rctB and toxR genes[J].Int J Syst Evol Microbiol,2010,60(1):154-165.
[21] CHAKRAVORTY S,HELB D,BURDAY M,et al.A detailed analysis of 16S ribosomal RNA gene segments for the diagnosis of pathogenic bacteria[J].J Microbiol Methods,2007,69(2):330-339.
[22] WIDDER S,ALLEN RJ,PFEIFFER T,et al.Challenges in microbial ecology:building predictive understanding of community function and dynamics[J].Isme J,2016,10(11):2557-2568.
[23] KNIGHT R,VRBANAC A,TAYLOR BC,et al.Best practices for analysing microbiomes[J].Nat Rev Microbiol,2018,16(7):410-422.
[24] URBANIAK C,CUMMINS J,BRACKSTONE M,et al.Microbiota of human breast tissue[J].Appl Environ Microbiol,2014,80(10):3007-3014.
[25] WANG H,ALTEMUS J,NIAZI F,et al.Breast tissue,oral and urinary microbiomes in breast cancer[J].Oncotarget,2017,8(50):88122-88138.
[26] COSTANTINI L,MAGNO S,ALBANESE D,et al.Characterization of human breast tissue microbiota from core needle biopsies through the analysis of multi hypervariable 16S rRNA gene regions[J].Sci Rep,2018,8(1):16893.
[27] BALDWIN DA,FELDMAN M,ALWINE JC,et al.Metagenomic assay for identification of microbial pathogens in tumor tissues[J].mBio,2014,5(5):e01714.
[28] JIAN C,LUUKKONEN P,YKI-JARVINEN H,et al.Quantitative PCR provides a simple and accessible method for quantitative microbiota profiling[J].PLoS One,2020,15(1):e0227285.
[29] BACCHETTI DE GREGORIS T,ALDRED N,CLARE AS,et al.Improvement of phylum- and class-specific primers for real-time PCR quantification of bacterial taxa[J].J Microbiol Methods,2011,86(3):351-356.
[30] RINTTILA T,KASSINEN A,MALINEN E,et al.Development of an extensive set of 16S rDNA-targeted primers for quantification of pathogenic and indigenous bacteria in faecal samples by real-time PCR[J].J Appl Microbiol,2004,97(6):1166-1177.
[31] VANHOUTTE T,DE PRETER V,DE BRANDT E,et al.Molecular monitoring of the fecal microbiota of healthy human subjects during administration of lactulose and saccharomyces boulardii[J].Appl Environ Microbiol,2006,72(9):5990-5997.
[32] MATSUKI T,WATANABE K,FUJIMOTO J,et al.Quantitative PCR with 16S rRNA-gene-targeted species-specific primers for analysis of human intestinal bifidobacteria[J].Appl Environ Microbiol,2004,70(1):167-173.
[33] LUU TH,MICHEL C,BARD JM,et al.Intestinal proportion of blautia sp is associated with clinical stage and histoprognostic grade in patients with early-stage breast cancer[J].Nutrition and Cancer-an International Journal,2017,69(2):267-275.
[34] WANG RF,CAO WW,CERNIGLIA CE.PCR detection and quantitation of predominant anaerobic bacteria in human and animal fecal samples[J].Appl Environ Microbiol,1996,62(4):1242-1247.
[35] GUO X,XIA X,TANG R,et al.Development of a real-time PCR method for firmicutes and bacteroidetes in faeces and its application to quantify intestinal population of obese and lean pigs[J].Lett Appl Microbiol,2008,47(5):367-373.
[36] PENDERS J,VINK C,DRIESSEN C,et al.Quantification of bifidobacterium spp.,escherichia coli and clostridium difficile in faecal samples of breast-fed and formula-fed infants by real-time PCR[J].FEMS Microbiol Lett,2005,243(1):141-147.
[37] YAMAMURA K,BABA Y,NAKAGAWA S,et al.Human microbiome fusobacterium nucleatum in esophageal cancer tissue is associated with prognosis[J].Clinical Cancer Research,2016,22(22):5574-5581.
[38] ROHDE A,HAMMERL JA,APPEL B,et al.Differential detection of pathogenic Yersinia spp.by fluorescence in situ hybridization[J].Food Microbiol,2017,62:39-45.
[39] AMANN RI,LUDWIG W,SCHLEIFER KH.Phylogenetic identification and in situ detection of individual microbial cells without cultivation[J].Microbiol Rev,1995,59(1):143-169.
[40] STEPINSKA M,OLSZEWSKA-SOSINSKA O,LAU-DWORAK M,et al.Identification of intracellular bacteria in adenoid and tonsil tissue specimens:the efficiency of culture versus fluorescent in situ hybridization(FISH)[J].Curr Microbiol,2014,68(1):21-29.
[41] BALHOUSE BN,PATTERSON L,SCHMELZ EM,et al.N-(3-oxododecanoyl)-L-homoserine lactone interactions in the breast tumor microenvironment:implications for breast cancer viability and proliferation in vitro[J].PLoS One,2017,12(7):e0180372.
[42] CHEN P,SUN W,HE Y.Comparison of the next-generation sequencing(NGS) technology with culture methods in the diagnosis of bacterial and fungal infections[J].J Thorac Dis,2020,12(9):4924-4929.
[43] SAUD HUSSEIN A,IBRAHEEM SALIH N,HASHIM SAADOON I.Effect of microbiota in the development of breast cancer[J].Arch Razi Inst,2021,76(4):761-768.
[44] THYAGARAJAN S,ZHANG Y,THAPA S,et al.Comparative analysis of racial differences in breast tumor microbiome[J].Sci Rep,2020,10(1):14116.
[45] JARMAN R,RIBEIRO-MILOGRANA S,KALLE W.Potential of the microbiome as a biomarker for early diagnosis and prognosis of breast cancer[J].J Breast Cancer,2020,23(6):579-587.
[46] DIELEMAN S,AARNOUTSE R,ZIEMONS J,et al.Exploring the potential of breast microbiota as biomarker for breast cancer and therapeutic response[J].Am J Pathol,2021,191(6):968-982.
[47] TZENG A,SANGWAN N,JIA M,et al.Human breast microbiome correlates with prognostic features and immunological signatures in breast cancer[J].Genome Med,2021,13(1):60.
[48] NORUM JH,ANDERSEN K,SORLIE T.Lessons learned from the intrinsic subtypes of breast cancer in the quest for precision therapy[J].Br J Surg,2014,101(8):925-938.
[49] BARZGAR BAROUGH N,SAJJADIAN F,JALILZADEH N,et al.Understanding breast cancer heterogeneity through non-genetic heterogeneity[J].Breast Cancer,2021,28(4):777-791.
[50] MAO AW,BARCK H,YOUNG J,et al.Identification of a novel cancer microbiome signature for predicting prognosis of human breast cancer patients[J].Clin Transl Oncol,2022,24(3):597-604.